Package: dfoliatR 0.3.0

dfoliatR: Detection and Analysis of Insect Defoliation Signals in Tree Rings

Tools to identify, quantify, analyze, and visualize growth suppression events in tree rings that are often produced by insect defoliation. Described in Guiterman et al. (2020) <doi:10.1016/j.dendro.2020.125750>.

Authors:Chris Guiterman [aut, cre], Ann Lynch [aut], Jodi Axelson [aut]

dfoliatR_0.3.0.tar.gz
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dfoliatR.pdf |dfoliatR.html✨
dfoliatR/json (API)
NEWS

# Install 'dfoliatR' in R:
install.packages('dfoliatR', repos = c('https://chguiterman.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/chguiterman/dfoliatr/issues

Datasets:
  • dmj_defol - Demi John dfol object
  • dmj_h - Demi John Douglas-fir
  • dmj_nh - Demi John area ponderosa pine
  • dmj_obr - Demi John outbreak object
  • efk_defol - East Fork defol object
  • efk_h - East Fork Jemez River Douglas-fir
  • efk_nh - Baca ponderosa pine chronology
  • efk_obr - East Fork outbreak object

On CRAN:

budwormdefoliatorsdendrochronologydendroecologydisturbanceforestsinsectsoutbreaktree-rings

4.89 score 7 stars 22 scripts 210 downloads 20 exports 78 dependencies

Last updated 1 years agofrom:e5a3470f9f. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 01 2024
R-4.5-winOKNov 01 2024
R-4.5-linuxOKNov 01 2024
R-4.4-winOKNov 01 2024
R-4.4-macOKNov 01 2024
R-4.3-winOKNov 01 2024
R-4.3-macOKNov 01 2024

Exports:as_defolas_obras.defolas.obrdefoldefol_statsdefoliate_treesget_defol_eventsgsiid_defoliationis.defolis.obrobroutbreakoutbreak_statsplot_defolplot_outbreaksample_depthseries_namesstack_defoliation

Dependencies:abindbackportsbootbroomcarcarDataclicolorspacecorrplotcowplotcpp11DerivdigestdoBydplRdplyrfansifarverforcatsFormulagenericsggplot2ggpubrggrepelggsciggsignifgluegridExtragtableisobandlabelinglatticelifecyclelme4magrittrMASSMatrixMatrixModelsmatrixStatsmgcvmicrobenchmarkminqamodelrmunsellnlmenloptrnnetnumDerivpbkrtestpillarpkgconfigpngpolynompurrrquantregR.methodsS3R.ooR.utilsR6RColorBrewerRcppRcppEigenrlangrstatixscalessignalSparseMstringistringrsurvivaltibbletidyrtidyselectutf8vctrsviridisLitewithrXML

Introduction to dfoliatR

Chris Guiterman

Rendered fromintro-to-dfoliatR.Rmdusingknitr::rmarkdownon Nov 01 2024.

Last update: 2023-08-09
Started: 2019-12-06