Package: dfoliatR 0.3.0

dfoliatR: Detection and Analysis of Insect Defoliation Signals in Tree Rings

Tools to identify, quantify, analyze, and visualize growth suppression events in tree rings that are often produced by insect defoliation. Described in Guiterman et al. (2020) <doi:10.1016/j.dendro.2020.125750>.

Authors:Chris Guiterman [aut, cre], Ann Lynch [aut], Jodi Axelson [aut]

dfoliatR_0.3.0.tar.gz
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dfoliatR.pdf |dfoliatR.html✨
dfoliatR/json (API)
NEWS

# Install 'dfoliatR' in R:
install.packages('dfoliatR', repos = c('https://chguiterman.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/chguiterman/dfoliatr/issues

Pkgdown site:https://chguiterman.github.io

Datasets:
  • dmj_defol - Demi John dfol object
  • dmj_h - Demi John Douglas-fir
  • dmj_nh - Demi John area ponderosa pine
  • dmj_obr - Demi John outbreak object
  • efk_defol - East Fork defol object
  • efk_h - East Fork Jemez River Douglas-fir
  • efk_nh - Baca ponderosa pine chronology
  • efk_obr - East Fork outbreak object

On CRAN:

Conda:

budwormdefoliatorsdendrochronologydendroecologydisturbanceforestsinsectsoutbreaktree-rings

4.89 score 7 stars 22 scripts 258 downloads 20 exports 81 dependencies

Last updated 2 years agofrom:e5a3470f9f. Checks:8 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKFeb 25 2025
R-4.5-winOKFeb 25 2025
R-4.5-macOKFeb 25 2025
R-4.5-linuxOKFeb 25 2025
R-4.4-winOKFeb 25 2025
R-4.4-macOKFeb 25 2025
R-4.3-winOKFeb 25 2025
R-4.3-macOKFeb 25 2025

Exports:as_defolas_obras.defolas.obrdefoldefol_statsdefoliate_treesget_defol_eventsgsiid_defoliationis.defolis.obrobroutbreakoutbreak_statsplot_defolplot_outbreaksample_depthseries_namesstack_defoliation

Dependencies:abindbackportsbootbroomcarcarDataclicolorspacecorrplotcowplotcpp11DerivdigestdoBydplRdplyrfansifarverforcatsFormulagenericsggplot2ggpubrggrepelggsciggsignifgluegridExtragtableisobandlabelinglatticelifecyclelme4magrittrMASSMatrixMatrixModelsmatrixStatsmgcvmicrobenchmarkminqamodelrmunsellnlmenloptrnnetnumDerivpbkrtestpillarpkgconfigpngpolynompurrrquantregR.methodsS3R.ooR.utilsR6rbibutilsRColorBrewerRcppRcppEigenRdpackreformulasrlangrstatixscalessignalSparseMstringistringrsurvivaltibbletidyrtidyselectutf8vctrsviridisLitewithrXML

Introduction to dfoliatR

Chris Guiterman

Rendered fromintro-to-dfoliatR.Rmdusingknitr::rmarkdownon Feb 25 2025.

Last update: 2023-08-09
Started: 2019-12-06